probeMatch-methods {oligo} | R Documentation |
Methods for perfect match and mismatch probes.
pm(object, genenames=NULL) pmindex(object) pm(object)<-value mm(object, genenames=NULL) mmindex(object) mm(object)<-value
object |
FeatureSet object |
genenames |
character vector with the featureset names of interest |
value |
new values to replace the PM/MM matrices. |
pm
and mm
will return respectively the PM and MM
matrices associated to the FeatureSet object.
pmindex
and mmindex
will return vectors containing the
indexes for the PM and MM probes.
## Do not run ## FeatureSetObject <- read.celfiles(list.celfiles()) ## pms <- pm(FeatureSetObject)