File parsers {oligo}R Documentation

XYS files parser.

Description

These functions provide parsing capabilities to the oligo package, making it possible to read XYS files.

Usage

read.xysfiles(filenames, phenoData = new("AnnotatedDataFrame"), description =
NULL, notes = "", verbose = FALSE)
readonexysfile(filename)
readxysHeader(filename)

Arguments

filenames character vector containing the names of the files to be read.
filename string with the name of the file
phenoData phenoData object.
description MIAME object.
notes notes.
verbose logical. Verbose flag.

Details

The functions readonexysfile and readxysHeader are not expected to be used by the final user. They are mainly functions for internal use.

Value

The functions return an FeatureSet object.

See Also

list.celfiles, read.celfiles, list.xysfiles

Examples

## Do not run
## FeatureSetObject <- read.xysfiles(list.xysfiles())

[Package oligo version 0.99.15 Index]