BAGS

This is the development version of BAGS; for the stable release version, see BAGS.

A Bayesian Approach for Geneset Selection

Bioconductor version: Development (3.21)

R package providing functions to perform geneset significance analysis over simple cross-sectional data between 2 and 5 phenotypes of interest.

Author: Alejandro Quiroz-Zarate

Maintainer: Alejandro Quiroz-Zarate <aquiroz at jimmy.harvard.edu>

Citation (from within R, enter citation("BAGS")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BAGS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BAGS")

BAGS: A Bayesian Approach for Geneset Selection.	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Bayesian, Software
Version	2.47.0
In Bioconductor since	BioC 2.13 (R-3.0) (11 years)
License	Artistic-2.0
Depends	R (>= 2.10), breastCancerVDX, Biobase
Imports
System Requirements
URL

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Depends On Me
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BAGS_2.47.0.tar.gz
Windows Binary (x86_64)	BAGS_2.47.0.zip
macOS Binary (x86_64)	BAGS_2.47.0.tgz
macOS Binary (arm64)	BAGS_2.47.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BAGS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/BAGS
Bioc Package Browser	https://code.bioconductor.org/browse/BAGS/
Package Short Url	https://bioconductor.org/packages/BAGS/
Package Downloads Report	Download Stats