BiocBaseUtils
This is the development version of BiocBaseUtils; for the stable release version, see BiocBaseUtils.
General utility functions for developing Bioconductor packages
Bioconductor version: Development (3.21)
The package provides utility functions related to package development. These include functions that replace slots, and selectors for show methods. It aims to coalesce the various helper functions often re-used throughout the Bioconductor ecosystem.
Author: Marcel Ramos [aut, cre] (ORCID:
Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>
citation("BiocBaseUtils")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("BiocBaseUtils")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocBaseUtils")| BiocBaseUtils Quick Start | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Infrastructure, Software |
| Version | 1.9.0 |
| In Bioconductor since | BioC 3.16 (R-4.2) (2 years) |
| License | Artistic-2.0 |
| Depends | R (>= 4.2.0) |
| Imports | methods, utils |
| System Requirements | |
| URL | |
| Bug Reports | https://www.github.com/Bioconductor/BiocBaseUtils/issues |
See More
| Suggests | knitr, rmarkdown, BiocStyle, tinytest |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | AlphaMissenseR, AnVIL, AnVILAz, AnVILGCP, AnVILPublish, BiocCheck, BiocFHIR, cBioPortalData, DNAfusion, iSEEfier, MultiAssayExperiment, RaggedExperiment, TCGAutils, TENxIO, UniProt.ws, VisiumIO, SingleCellMultiModal |
| Suggests Me | scifer |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BiocBaseUtils_1.9.0.tar.gz |
| Windows Binary (x86_64) | BiocBaseUtils_1.9.0.zip |
| macOS Binary (x86_64) | BiocBaseUtils_1.9.0.tgz |
| macOS Binary (arm64) | BiocBaseUtils_1.9.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocBaseUtils |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocBaseUtils |
| Bioc Package Browser | https://code.bioconductor.org/browse/BiocBaseUtils/ |
| Package Short Url | https://bioconductor.org/packages/BiocBaseUtils/ |
| Package Downloads Report | Download Stats |