flowCHIC
This is the development version of flowCHIC; for the stable release version, see flowCHIC.
Analyze flow cytometric data using histogram information
Bioconductor version: Development (3.21)
A package to analyze flow cytometric data of complex microbial communities based on histogram images
Author: Joachim Schumann <joachim.schumann at ufz.de>, Christin Koch <christin.koch at ufz.de>, Ingo Fetzer <info.fetzer at stockholmresilience.su.se>, Susann Müller <susann.mueller at ufz.de>
Maintainer: Author: Joachim Schumann <joachim.schumann at ufz.de>
citation("flowCHIC")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("flowCHIC")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowCHIC")| Analyze flow cytometric data using histogram information | R Script | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, Clustering, FlowCytometry, ImmunoOncology, Software, Visualization |
| Version | 1.41.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (10 years) |
| License | GPL-2 |
| Depends | R (>= 3.1.0) |
| Imports | methods, flowCore, EBImage, vegan, hexbin, ggplot2, grid |
| System Requirements | |
| URL | http://www.ufz.de/index.php?en=16773 |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowCHIC_1.41.0.tar.gz |
| Windows Binary (x86_64) | flowCHIC_1.41.0.zip (64-bit only) |
| macOS Binary (x86_64) | flowCHIC_1.41.0.tgz |
| macOS Binary (arm64) | flowCHIC_1.41.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/flowCHIC |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowCHIC |
| Bioc Package Browser | https://code.bioconductor.org/browse/flowCHIC/ |
| Package Short Url | https://bioconductor.org/packages/flowCHIC/ |
| Package Downloads Report | Download Stats |