frma
This is the development version of frma; for the stable release version, see frma.
Frozen RMA and Barcode
Bioconductor version: Development (3.21)
Preprocessing and analysis for single microarrays and microarray batches.
Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau
Maintainer: Matthew N. McCall <mccallm at gmail.com>
Citation (from within R, enter
citation("frma")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("frma")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("frma")| frma: Preprocessing for single arrays and array batches | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Microarray, Preprocessing, Software |
| Version | 1.59.0 |
| In Bioconductor since | BioC 2.6 (R-2.11) (14.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10.0), Biobase(>= 2.6.0) |
| Imports | Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils, BiocGenerics |
| System Requirements | |
| URL | http://bioconductor.org |
See More
| Suggests | hgu133afrmavecs, frmaExampleData |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ChIPXpress, rat2302frmavecs, DeSousa2013 |
| Suggests Me | frmaTools, ath1121501frmavecs |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | frma_1.59.0.tar.gz |
| Windows Binary (x86_64) | frma_1.59.0.zip (64-bit only) |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/frma |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/frma |
| Bioc Package Browser | https://code.bioconductor.org/browse/frma/ |
| Package Short Url | https://bioconductor.org/packages/frma/ |
| Package Downloads Report | Download Stats |