rqubic
This is the development version of rqubic; for the stable release version, see rqubic.
Qualitative biclustering algorithm for expression data analysis in R
Bioconductor version: Development (3.21)
This package implements the QUBIC algorithm introduced by Li et al. for the qualitative biclustering with gene expression data.
Author: Jitao David Zhang [aut, cre, ctb] (ORCID:
Maintainer: Jitao David Zhang <jitao_david.zhang at roche.com>
citation("rqubic")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("rqubic")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rqubic")| Qualitative Biclustering with Bioconductor Package rqubic | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Clustering, Software |
| Version | 1.53.0 |
| In Bioconductor since | BioC 2.9 (R-2.14) (13 years) |
| License | GPL-2 |
| Depends | |
| Imports | methods, Biobase, BiocGenerics, biclust |
| System Requirements | |
| URL |
See More
| Suggests | RColorBrewer |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | miRSM |
| Suggests Me | RcmdrPlugin.BiclustGUI |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | rqubic_1.53.0.tar.gz |
| Windows Binary (x86_64) | rqubic_1.53.0.zip |
| macOS Binary (x86_64) | rqubic_1.53.0.tgz |
| macOS Binary (arm64) | rqubic_1.53.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/rqubic |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rqubic |
| Bioc Package Browser | https://code.bioconductor.org/browse/rqubic/ |
| Package Short Url | https://bioconductor.org/packages/rqubic/ |
| Package Downloads Report | Download Stats |