617fcd302610c71908e8f0c906cec290 *DESCRIPTION
7faa0450ce3b8a28a70e02cdd575a383 *NAMESPACE
e2159201c7864abc98c7b48a8db45a08 *R/adt_profiles.R
a0124d8292bc554d699e660af1cc5acb *R/basilisk.R
1ce61505205c249cdef3e1282a0e74ea *R/cache_citeseq_pbmcs.R
d77b83ec2df47c9bbd7fc3fff1b65551 *R/citeseqApp.R
95b3908fbfb838c184ba89a091208285 *R/data.R
7cab15d2d2e20a70f12b9d7124bd299f *R/new_citeseq.R
3a9340275bf63f984e9feedfe6cd3d42 *R/scanpy.R
9f54c8ac5b96ea0ebed24d64b155dafc *R/scverse_helper.R
544adcd05a7d5fce698e6b8d74df68ab *R/scvi.R
f2989c0e290d2a18ee5ebe5e1fcfa1f1 *README.md
63ece6733e7847031a5355371fedd453 *build/vignette.rds
9687da453d85a23e53c8c213f41640ae *data/clusters.adt.rda
e0a459dd070336be3fbabb50b7cab379 *data/clusters.rna.rda
cb2e610a431a5cfa9d827533f684abdf *inst/AnVIL/setup.Rmd
a640f6c1a3e1e077a21982dae76ac5a9 *inst/Docker/README.txt
5c849783c51cf48a5b5be4b10a34844f *inst/Docker/nvidpt_bioc.dfile
38d23fd9e54fd0bc28ca3d298806678b *inst/Notebooks/README.txt
5bf0658fe76a5c1f96dca9a405c5d5ba *inst/Notebooks/totalVI_newapi_COLAB.py
01cb8a2b8d21bd6921c43b0f1bda767a *inst/doc/citeseq_tut.R
6b92cb18aed9d409ed0b4ba6d7d59ce8 *inst/doc/citeseq_tut.Rmd
3d41f98149d808a35fc29a0ea7e7a47f *inst/doc/citeseq_tut.html
689333b4ffa3589a274587df4abb5b38 *inst/doc/compch12.R
6d9ef8612e1db710002b66b61f8b3ba9 *inst/doc/compch12.Rmd
3c7120bec6ceac9cf4f3cdc68a35d56d *inst/doc/compch12.html
dd1241242f5640dee7fb5914ecedf281 *inst/doc/new_citeseq.R
4dfcba1542430af9fb2a6b7ddf4253d8 *inst/doc/new_citeseq.Rmd
1524b8852c6f5a57ed2531a93460f52c *inst/doc/new_citeseq.html
5aba48960c0fdfc64ae0c54a87f3bd83 *inst/doc/scviR.R
d4f76934133ad2f3617089a09f76cdba *inst/doc/scviR.Rmd
1de52b91f1e7fc83089a16c767434c18 *inst/doc/scviR.html
c7ed2943767b06e0bbc630a100d12db3 *inst/scripts/probeOsca.hist.txt
c266e5cdebd948ba3dbbc8739fe48ae8 *inst/scripts/rest
3cea791b03d450da0f65d87495f61c3e *inst/scripts/timer.R
f0f93a3bb6525545ab52d839b98abf66 *inst/scripts/trainOnE44.R
ab1a24bda3725ca3e61178a2bd5dd796 *inst/scripts/unpack.R
a06ad4fa84331c44884969a5a2ccbd71 *inst/scripts/usetotal.R
9d066889d933192b4d21279451d00a82 *man/MuDataR.Rd
6cbbb237e47268bb87585371796cb82d *man/adtProfiles.Rd
54a321fb21c1119acaf313792ab79dbe *man/anndataR.Rd
a28ae408497985d80977d433d80790c8 *man/bsklenv.Rd
a263dfda954fc18ad9b4479931e9aa60 *man/cacheCiteseq5k10kPbmcs.Rd
cf191746d20a23a2ef942c6feab78316 *man/cacheCiteseq5k10kTutvae.Rd
c2c1bf6419b7b7d9ee203aee1b0bf581 *man/cacheCiteseqHDPdata.Rd
a411ad8af98116ff39ea9335329e5036 *man/cacheCiteseqHDPmodel.Rd
8fd92574026354b3c702b77bc5c78eb4 *man/clusters.adt.Rd
81effc4436037d7fc66babcdb96d28f1 *man/clusters.rna.Rd
66a34d20e34b1af2fbe7e2952da1a241 *man/exploreSubcl.Rd
39d0087db882523c4433db85167e225e *man/figures/booleanSubcl.png
89d22b7b824ee4715ea27c22924d1f85 *man/figures/subclusApp.png
69985ca262a28e8e92d59e8f21a17d9d *man/getCh12AllSce.Rd
ec396961a221b8fe167fe5b0f3b1726d *man/getCh12Sce.Rd
f5bcc2db0f1b3d6267e60270c8256d33 *man/getCiteseq5k10kPbmcs.Rd
8941c3d78e9e5d7b3b5029d1d8b1de70 *man/getCiteseqTutvae.Rd
437159a442ab9ee0d4effd58fc3cb288 *man/getPro5k10kAdata.Rd
eadb1f5f7411e1c9d1d08d375bd826df *man/getSubclLM.Rd
cdc590687c308dcf9729430b07eed56b *man/getSubclusteringFeatures.Rd
e8b39d13524ecf532f366b8c67815168 *man/getTotalVI5k10kAdata.Rd
0eb547623cb6eb34b4817bd618d2b01c *man/getTotalVINormalized5k10k.Rd
3da14465c07f9cfb9e065050acc4dbac *man/muonR.Rd
a948d74ebb0a8febd9bb7883da52f0c3 *man/pyHelp2.Rd
b11d615fdae2f76d93d633b35d873602 *man/scanpyHelper.Rd
bf3305c2f9cd3b1103e7bedd0c0a26a1 *man/scanpyR.Rd
667e62b11308f2b5935d1e541c1da4e9 *man/scviHelper.Rd
715594fa7681b50708ae810040a574ed *man/scviR.Rd
5895edd2692ec7c7d419b576324b29e6 *tests/test.R
ccf0af3f2a57eb2932aece5b366d3f2a *tests/testthat/test_one.R
6b92cb18aed9d409ed0b4ba6d7d59ce8 *vignettes/citeseq_tut.Rmd
6d9ef8612e1db710002b66b61f8b3ba9 *vignettes/compch12.Rmd
4dfcba1542430af9fb2a6b7ddf4253d8 *vignettes/new_citeseq.Rmd
d4f76934133ad2f3617089a09f76cdba *vignettes/scviR.Rmd
