BSgenome.Alyrata.JGI.v1
This is the development version of BSgenome.Alyrata.JGI.v1; for the stable release version, see BSgenome.Alyrata.JGI.v1.
Arabidopsis lyrata full genome (JGI version V1.0)
Bioconductor version: Development (3.21)
Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.
Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel
Maintainer: Jian-Feng Mao <jianfeng.mao at gmail.com>
Citation (from within R, enter
citation("BSgenome.Alyrata.JGI.v1")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("BSgenome.Alyrata.JGI.v1")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Alyrata, AnnotationData, Genetics |
| Version | 1.0.1 |
| License | Artistic-2.0 |
| Depends | BSgenome(>= 1.58.0) |
| Imports | BSgenome |
| System Requirements | |
| URL |
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Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BSgenome.Alyrata.JGI.v1_1.0.1.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Package Short Url | https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1/ |
| Package Downloads Report | Download Stats |