vulcandata

This is the development version of vulcandata; for the stable release version, see vulcandata.

VirtUaL ChIP-Seq data Analysis using Networks, dummy dataset


Bioconductor version: Development (3.20)

This package provides a dummy regulatory network and ChIP-Seq dataset for running examples in the vulcan package

Author: Federico M. Giorgi, Andrew N. Holding, Florian Markowetz

Maintainer: Federico M. Giorgi <federico.giorgi at gmail.com>

Citation (from within R, enter citation("vulcandata")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("vulcandata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("vulcandata")
Vulcan: VirtUaL ChIP-Seq Analysis through Networks, dummy datasets PDF R Script
Reference Manual PDF

Details

biocViews CancerData, ChIPSeqData, ExperimentData, Homo_sapiens_Data
Version 1.27.0
License LGPL-3
Depends
Imports utils
System Requirements
URL
See More
Suggests viper
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me vulcan
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package vulcandata_1.27.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/vulcandata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/vulcandata
Package Short Url https://bioconductor.org/packages/vulcandata/
Package Downloads Report Download Stats