xmapbridge
Export plotting files to the xmapBridge for visualisation in X:Map
Bioconductor version: Release (3.20)
xmapBridge can plot graphs in the X:Map genome browser. This package exports plotting files in a suitable format.
Author: Tim Yates <Tim.Yates at cruk.manchester.ac.uk> and Crispin J Miller <Crispin.Miller at cruk.manchester.ac.uk>
Maintainer: Chris Wirth <Christopher.Wirth at cruk.manchester.ac.uk>
Citation (from within R, enter
citation("xmapbridge")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("xmapbridge")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("xmapbridge")| xmapbridge primer | R Script | |
| Reference Manual |
Details
| biocViews | Annotation, ReportWriting, Software, Visualization |
| Version | 1.64.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (16 years) |
| License | LGPL-3 |
| Depends | R (>= 2.0), methods |
| Imports | |
| System Requirements | |
| URL | http://xmap.picr.man.ac.uk http://www.bioconductor.org |
See More
| Suggests | RUnit, RColorBrewer |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | xmapbridge_1.64.0.tar.gz |
| Windows Binary (x86_64) | xmapbridge_1.64.0.zip |
| macOS Binary (x86_64) | xmapbridge_1.64.0.tgz |
| macOS Binary (arm64) | xmapbridge_1.64.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/xmapbridge |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/xmapbridge |
| Bioc Package Browser | https://code.bioconductor.org/browse/xmapbridge/ |
| Package Short Url | https://bioconductor.org/packages/xmapbridge/ |
| Package Downloads Report | Download Stats |