TxDb.Mmusculus.UCSC.mm9.knownGene
This is the released version of TxDb.Mmusculus.UCSC.mm9.knownGene; for the devel version, see TxDb.Mmusculus.UCSC.mm9.knownGene.
Annotation package for TxDb object(s)
Bioconductor version: Release (3.20)
Exposes an annotation databases generated from UCSC by exposing these as TxDb objects
Author: Marc Carlson, Bioconductor Package Maintainer <maintainer at bioconductor.org> [cre]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R, enter
citation("TxDb.Mmusculus.UCSC.mm9.knownGene")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TxDb.Mmusculus.UCSC.mm9.knownGene")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, Genetics, Mus_musculus, TxDb |
| Version | 3.2.2 |
| License | Artistic-2.0 |
| Depends | GenomicFeatures(>= 1.21.30) |
| Imports | AnnotationDbi |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ChIPQC, Cogito, INSPEcT, Rmmquant |
| Suggests Me | annotatr, CAGEfightR, chipseq, compEpiTools, EpiCompare, ggbio, GRaNIE, spatzie, BSgenome.Mmusculus.UCSC.mm9, chipenrich.data, CAGEWorkflow |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | TxDb.Mmusculus.UCSC.mm9.knownGene_3.2.2.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Package Short Url | https://bioconductor.org/packages/TxDb.Mmusculus.UCSC.mm9.knownGene/ |
| Package Downloads Report | Download Stats |