Prostar

This is the development version of Prostar; for the stable release version, see Prostar.

Provides a GUI for DAPAR

Bioconductor version: Development (3.21)

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Citation (from within R, enter citation("Prostar")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Prostar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software
Version	1.39.0
In Bioconductor since	BioC 3.2 (R-3.2) (9 years)
License	Artistic-2.0
Depends	R (>= 4.4.0)
Imports	DAPAR(>= 1.35.1), DAPARdata(>= 1.30.0), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot, Biobase, DT, R.utils, RColorBrewer, XML, colourpicker, gtools, markdown, rclipboard, sass, shinyTree, shinyWidgets
System Requirements
URL	http://www.prostar-proteomics.org/
Bug Reports	https://github.com/edyp-lab/Prostar/issues

Suggests	BiocStyle, BiocManager, testthat, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/Prostar
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Prostar
Package Short Url	https://bioconductor.org/packages/Prostar/
Package Downloads Report	Download Stats