Prostar
Provides a GUI for DAPAR
Bioconductor version: Release (3.20)
This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.
Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]
Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>
citation("Prostar")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Prostar")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Prostar")| Prostar User Manual | HTML | R Script |
| Reference Manual | ||
| README | Text | |
| NEWS | Text |
Details
| biocViews | GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software |
| Version | 1.38.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (9 years) |
| License | Artistic-2.0 |
| Depends | R (>= 4.4.0) |
| Imports | DAPAR(>= 1.35.1), DAPARdata(>= 1.30.0), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot, Biobase, DT, R.utils, RColorBrewer, XML, colourpicker, gtools, markdown, rclipboard, sass, shinyTree, shinyWidgets |
| System Requirements | |
| URL | http://www.prostar-proteomics.org/ |
| Bug Reports | https://github.com/edyp-lab/Prostar/issues |
See More
| Suggests | BiocStyle, BiocManager, testthat, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Prostar_1.38.0.tar.gz |
| Windows Binary (x86_64) | Prostar_1.38.0.zip |
| macOS Binary (x86_64) | Prostar_1.38.0.tgz |
| macOS Binary (arm64) | Prostar_1.38.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Prostar |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Prostar |
| Bioc Package Browser | https://code.bioconductor.org/browse/Prostar/ |
| Package Short Url | https://bioconductor.org/packages/Prostar/ |
| Package Downloads Report | Download Stats |